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Software

• Side-chain positioning.
  Download software to generate LP/IPs for solving the side-chain positioning problem.
• MotifSearch.
  Search for DNA binding sites, using one of several methods. (Webform and software download.)
• Inferring ancestral amino acid content.
  Download software to infer ancestral amino acid usage for a set of protein sequences.
• bZIP Partner Prediction Program Webpage.
  Score potential bZIP coiled-coil protein interactions.
• Viral Membrane-Fusion Proteins Program Webpage.
  Detect “hairpin” coiled-coil-like structures in viral membrane fusion proteins.
• Histidine Kinase Program Webpage.
  Analyze putative coiled-coil-like domains in histidine kinases.