Group Members
Research Scientist
- Anton Persikov
PhD students
- Tony Capra
- Jesse Farnham
- Zia Khan
- Alex Ochoa
- Jimin Song
- Peng Jiang
- Tao Yue
Alumni
- Dawn Brooks (PhD, 2002). “Evolution of amino
acid composition over deep time: clues in ancient, extant sequences.”
Current position: Medical student.
- Jessica Fong (PhD, 2005). “Computational methods for predicting
coiled-coil protein interactions.”
Current position: Staff scientist, National Center for Biotechnology Information, NIH.
- Carl Kingsford (PhD, 2005). “Computational approaches to
problems in protein structure and function.”
Current position: Assistant professor, University of Maryland Computer
Science Department.
- Elena Zaslavsky (PhD, 2005). “Algorithms for representation
and discovery of transcription factor binding sites.” Current
position: Research assistant professor, Mt. Sinai School of Medicine.
- Robert Osada (PhD, 2006). “Computational methods for predicting
transcription factor binding sites.” Current position: Goldman Sachs.
- Elena Nabieva (PhD, 2007). “Topology and function in
protein interaction networks.” Current position: Postdoctoral
fellow in Susan Lindquist’s Lab.
- Eric Banks (PhD, 2009). “Algorithms for analyzing and interrogating
protein interaction networks.” Current position: Broad Institute.
- Tony Capra (PhD, 2009). “ Algorithms for the identification
of functional sites in proteins.”
- Kam Jim (MS, 2002).
- Nick Jacobson (MS, Chemistry, 2005).