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Computation and Data Analysis in Biology and Information Sciences
Fall 2007 - Spring 2008
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Spring 2008 Schedule
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February 6
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Synthetic biology: from programming bacteria to programming stem cells
Ron Weiss, Electrical Engineering, Princeton University
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February 13
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Translational Research - From the Bench to the Bedside (and Back)
Guna Rajagopal, Bioinformatics, The Cancer Institute of New Jersey
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February 20
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The beginning of the ends: a curvature-mediated mechanism for localization of lipids to bacterial poles
Kerwyn (KC) Huang, Molecular Biology, Princeton University
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February 27
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Bioinformatics of protein domains: new computational approaches for the detection of protein domains and their interactions
Maricel Kann, Biological Sciences, University of Maryland
Slides
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March 5
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Bayesian Variable Selection and Data Integration for Biological Regulatory Networks
Shane Jensen, Statistics, University of Pennsylvania
Slides
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March 12
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Qualitative/Quantitative Analysis of Biomolecular Network Dynamics
Eduardo Sontag, Math/BioMaPS, Rutgers University
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March 19 |
No Seminar --- Spring Break |
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March 26
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Locating and analyzing genetic switches in the genome
Tae Hoon Kim, Genetics, Yale University
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April 2
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Dynamics of chronic myeloid leukemia
Franziska Michor, Computational Biology, Memorial Sloan Kettering Cancer Center
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April 9
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Internal representation of environment in regulatory networks
Saeed Tavazoie, Molecular Biology and the Lewis-Sigler Institute for Integrative Genomics, Princeton University
Room changed to Computer Science 105
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April 16
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Getting to personalized vascular medicine: development of patient specific boundary conditions for treatment planning
Brooke Steele, Biomedical Engineering, UNC/NCSU
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April 23
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Computational annotation of SNPs and rare variants
Rachel Karchin, Biomedical Engineering, Johns Hopkins University
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April 30
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Population structure prediction using support vector machines
Usman Roshan, Computer Science, NJIT
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Fall 2007 Schedule
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September 19 |
Relating Cellular to Molecular Specificity
Barry Honig, Biochemistry & Molecular Biophysics, Columbia University |
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September 26 |
Combinatorial Patterns of Somantic Gene Mutations in Cancer
Chen-Hsiang Yeang, Institute for Advanced Study |
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October 3 |
Cross-Platform Metabolomics and Metabonomics; Integrated use of NMR, MS, Proteomics, Transcriptomics and Statistics
Istvan Pelczer, Chemistry Department, Princeton University |
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October 10 |
Identification of Novel Structured RNAs Using Local Multiple Alignment and Homology Search
Zasha Weinberg, Yale University |
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October 17 |
A Genome-Wide Signaling Map for Animals
Josh Stuart, Biomolecular Engineering, University of California - Santa Cruz |
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October 24 |
Growth-Specific Programs of Gene Expression in Yeast
Edo Airoldi, Genomics, Princeton University |
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October 31 |
No Seminar --- Fall Break |
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November 7 |
Two's Company, Three's Irreconcilable? Fitting Binary Gene Trees to Non-Binary Species Trees
Dannie Durand, Computer Science, Carnegie Mellon University |
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November 14 |
In Silico Approaches to Transcriptional Regulation and its Evolution
Sridhar Hannenhalli, Genetics, University of Pennsylvania |
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November 21 |
Genetic Steganography: Searching for Conserved Motifs within Coding Regions
Josh Forman, Molecular Biology, Princeton University |
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November 28 |
Tissue Expression Profile Similarity Searches for Gene Discovery and Functional Prediction
Fabien Campagne, Department of Physiology and Biophysics, Weill Medical College, Cornell University |
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December 5 |
Identifying State Dependent Regulatory Modules
Yuval Kluger, Cell Biology, New York University School of Medicine |
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December 12 |
Using Computational Models of DNA to Predict Intrinsic and Extrinsic Nucleosome Positioning Signals
Alexandre Morozov, Physics, BioMaPS, Rutgers University |
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Seminars begin ~12:30 p.m., Lunch will be provided ~12:20 p.m. |
These seminars are partially supported by the Princeton Institute for Computational Science and Engineering (PICSciE) |
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Research seminars in conjunction with PRIME (Program for Research on Immune Modeling and Experimentation) |
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PICASso "Successes" Seminar
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Presentations will usually be given by local students and postdoctoral researchers, leading researchers are periodically invited to present special sessions about key "Successes of Computational Science" in their field; i.e., areas of success in the science that could not have been (or easily been) achieved without computational science. These seminars are indicated with a key icon. |
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Graduate students, post-docs and young faculty present overviews of their research projects and/or tutorials on computational methods they are using. |
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PICASSO MAILING LIST
If you would like to be kept informed of computationally-oriented events in (and around) Princeton, please SUBSCRIBE to the PICASso mailing list by visiting https://lists.cs.princeton.edu/mailman/listinfo/picasso. This page also contains information on how to UNSUBSCRIBE. |